Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913863.1_cds_XP_016463876.1_56962
CDS Infomation

[gene=LOC107786884] [db_xref=GeneID:107786884] [protein=MACPF domain-containing protein CAD1-like] [protein_id=XP_016463876.1] [location=complement(join(26427..27059,27470..27633,27752..27935,30089..30172,30357..30552,30674..30912,33335..33601))] [gbkey=CDS]
Sequence

ATGGAAGAAAATAACACAGCAGCAATTCATACAGCTATAAATGCAGTGCAATCATTAGGA
AGGGGATTTGATGTGAATTATGATACAAGATTGCTATATTGTAAGGGGGTGGGTGGGTCT
AGGGTTGTAGAGATTGATGAAGAACAGCAGCATACAAGGGATCTTTGTTTATATGATAAC
GTAGTGCTGCCTAATATTTCAAGGGATATTAAGAATTTTCAGGAGCCTGGTGGTCGAGAT
GGTTCTAGTGTTTGCAATTATAATGAGATGGTGGAATTTTTTAACAGAAAGGCTGATATT
TCAAGCCATTCTCCTCTTGGTAGCTTCAATGTAGCATTCAGTTTCACTGGTGCGAAGCAT
TTAGATGCTACCACTACAAAGACACTTTGTATGGATGGCTATTTCATACCACTTTCTAGA
CTTCAACTCATGAATTCACCGCTAGCCTTACAGGAAAGTGTTAGAAGAGCTGTCCCAGCA
TCATGGGACCCACCCGCATTAGCGAGCTTCATTGAAACTTTTGGGACTCACATAATTACA
TCCATAACTATCGGTGGTAAAGATGTAATTTACGTTAAACAGCACCTTTCATCACGCCTG
TCCACAATGGAAGTAAAAAGTTATGTTCATGATATCGGAAATCAGAGGTTCTCCAGCACA
GAAAGCCTTACAAGTTCAGGTCTATTGAAATACAAGGATAAGTCTAGCGATCCATCGATA
TTCAATAGCCAAGGAATATATCCCCAACCCACAAATGCTCCATATATTGCTGGGAATGGA
AAAGAGGATGTCACAGTCATTTTCAGAAGAAGGGGAGGGGATGATCTGGAACAAAGCCAC
ACCCAATGGGCAAAAACTGTCAGATCATCTCCGGATGTCATTGAGATGTCATTCTTCCCT
ATAACTCTTCTGCTTGAAGGGATCAAAGGGAAAGATCATCTGGCACGCGCTATAAGTCTC
TATCTTGAATACAAGCCTCAAATCGAAGAGCTGAGATATTTTCTGGAGTTTCAGGTCCCA
AGGGTATGGGCCCCTGTACAGTCGAGACTTCCAGGCCAACAACGGAAGGAACCTGTTTGC
CCACATCTGCAGTTCAGCATGATGGGGCAAAAGCTCTATATTAGCCAAGAACAAGTGTCG
GTGGGGCGTAAGCCTGTGACTGGCATGCGGCTAGCTCTTGAAGGTTCCAAGTCGAATAGA
TTATGTGTCTATATTCAACATCTGACTTCCCTTCCTAGAATCCTTCTGCCATGTTGGGAC
ACTCATGTAGCAATTGGCGCTCCAAAGTGGCAGGGCCCTGAAGAGCAAGATAGTAGGTGG
TTTGAGCCGGTGAAATGGAAGAACTTCTCCCACGTGAGTACTGCACCAATTGAGTGCCCT
GAAACTTTTATTGGTAATGATCACTCTGGCGTGTACATAGTGACGGGAGCTCAGCTTGGG
GTTTGGGACTTTGGGTCAAGAAATGTGTTGTATATGAAGCTTCTATATTCAAGGCTACCA
GGATGCACGATACAAAGATCACTGTGGGAGCACACCCCAAATGATAAGTCAAATAAACAG
GTCAATTGTGGGAATTACCATGGCGATGCAAGTTCTCTTACAGGGGAGAATATTATAGGT
AATAAGTTGGCAAAGTTTGTTGACATGACCGAGATGAGTAAGGGGCCTCAAGATCCTCCT
GGTCACTGGTTAGTGACAGGTGGAAAACTTGGTGTTGAGAAAGGGAGAATTGTTTTGAGA
TTGAAGTATTCCTTGTTAAATTATTAG

Peptide Sequence

PEP ID

XP_016463876.1
PEP Infomation

PREDICTED: MACPF domain-containing protein CAD1-like [Nicotiana tabacum]
Sequence

MEENNTAAIHTAINAVQSLGRGFDVNYDTRLLYCKGVGGSRVVEIDEEQQHTRDLCLYDN
VVLPNISRDIKNFQEPGGRDGSSVCNYNEMVEFFNRKADISSHSPLGSFNVAFSFTGAKH
LDATTTKTLCMDGYFIPLSRLQLMNSPLALQESVRRAVPASWDPPALASFIETFGTHIIT
SITIGGKDVIYVKQHLSSRLSTMEVKSYVHDIGNQRFSSTESLTSSGLLKYKDKSSDPSI
FNSQGIYPQPTNAPYIAGNGKEDVTVIFRRRGGDDLEQSHTQWAKTVRSSPDVIEMSFFP
ITLLLEGIKGKDHLARAISLYLEYKPQIEELRYFLEFQVPRVWAPVQSRLPGQQRKEPVC
PHLQFSMMGQKLYISQEQVSVGRKPVTGMRLALEGSKSNRLCVYIQHLTSLPRILLPCWD
THVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIECPETFIGNDHSGVYIVTGAQLG
VWDFGSRNVLYMKLLYSRLPGCTIQRSLWEHTPNDKSNKQVNCGNYHGDASSLTGENIIG
NKLAKFVDMTEMSKGPQDPPGHWLVTGGKLGVEKGRIVLRLKYSLLNY

Transcript Sequence

Gene sequence data has not been registered.